Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Gm24891-201ENSMUST00000104391 136 ntBASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Rprl1-201ENSMUST00000158050 327 ntBASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Gm28686-201ENSMUST00000187404 609 ntBASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Gm8365-201ENSMUST00000197334 648 ntBASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Mir7686-201ENSMUST00000200604 57 ntBASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Gm4157-201ENSMUST00000211647 679 ntBASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm12857-201ENSMUST00000117678 592 ntBASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm8100-201ENSMUST00000182906 988 ntBASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.29□□□□□ -0.12
Clrn2B2RVW2 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm10288-201ENSMUST00000084614 537 ntBASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn2B2RVW2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Gm14460-201ENSMUST00000121511 639 ntBASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.28□□□□□ -0.12
Clrn2B2RVW2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Gm23085-201ENSMUST00000157849 293 ntBASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Gm9540-201ENSMUST00000188230 478 ntBASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Gm10774-201ENSMUST00000188689 204 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms