Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.9□□□□□ -0.34
Scn1aA2APX8 Gm26461-201ENSMUST00000175064 290 ntBASIC12.9□□□□□ -0.34
Scn1aA2APX8 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.9□□□□□ -0.34
Scn1aA2APX8 Gm807-202ENSMUST00000224929 408 ntBASIC12.9□□□□□ -0.34
Scn1aA2APX8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Scn1aA2APX8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Scn1aA2APX8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
Scn1aA2APX8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scn1aA2APX8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scn1aA2APX8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Gm27552-201ENSMUST00000183351 62 ntBASIC12.89□□□□□ -0.35
Scn1aA2APX8 Gm27844-201ENSMUST00000183613 62 ntBASIC12.89□□□□□ -0.35
Scn1aA2APX8 Gm7848-201ENSMUST00000210739 718 ntBASIC12.89□□□□□ -0.35
Scn1aA2APX8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Gm12196-201ENSMUST00000120954 262 ntBASIC12.89□□□□□ -0.35
Scn1aA2APX8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Gm17040-202ENSMUST00000170597 889 ntBASIC12.89□□□□□ -0.35
Scn1aA2APX8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.89□□□□□ -0.35
Scn1aA2APX8 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.89□□□□□ -0.35
Scn1aA2APX8 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.89□□□□□ -0.35
Scn1aA2APX8 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.89□□□□□ -0.35
Scn1aA2APX8 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1aA2APX8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.88□□□□□ -0.35
Scn1aA2APX8 Gm26286-201ENSMUST00000104166 134 ntBASIC12.88□□□□□ -0.35
Scn1aA2APX8 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.88□□□□□ -0.35
Scn1aA2APX8 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.88□□□□□ -0.35
Scn1aA2APX8 Gm18711-201ENSMUST00000199341 750 ntBASIC12.88□□□□□ -0.35
Scn1aA2APX8 Gm5369-201ENSMUST00000217499 588 ntBASIC12.88□□□□□ -0.35
Scn1aA2APX8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms