Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm44094-201ENSMUST00000204703 2030 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 BC043934-202ENSMUST00000185694 2356 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 AC159195.3-201ENSMUST00000225162 2211 ntBASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Gm10766-202ENSMUST00000194123 606 ntBASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Gm7774-201ENSMUST00000200064 533 ntBASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Gm46209-201ENSMUST00000217912 553 ntBASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 AC161252.3-201ENSMUST00000225465 1549 ntBASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav8-1A0A075B641 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm28719-201ENSMUST00000187779 1757 ntBASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms