Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Snord83b-201ENSMUST00000104546 94 ntBASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Gm16479-201ENSMUST00000121706 932 ntBASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Rmrp-201ENSMUST00000157463 271 ntBASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Gm24136-201ENSMUST00000083374 165 ntBASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Upk1bQ9Z2C6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Gm12928-201ENSMUST00000117115 573 ntBASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Gm11637-201ENSMUST00000120601 592 ntBASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Gm16215-201ENSMUST00000161990 637 ntBASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk1bQ9Z2C6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Upk1bQ9Z2C6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Upk1bQ9Z2C6 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Upk1bQ9Z2C6 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Upk1bQ9Z2C6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms