Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Gm27390-201ENSMUST00000184516 176 ntBASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Mir6420-201ENSMUST00000185032 102 ntBASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Gm29396-201ENSMUST00000185659 716 ntBASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Gm38092-201ENSMUST00000195600 653 ntBASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn13Q9Z0S4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn13Q9Z0S4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Mir1247-201ENSMUST00000116706 82 ntBASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn13Q9Z0S4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms