Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Gm4909-201ENSMUST00000118749 794 ntBASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Gm25700-201ENSMUST00000177693 110 ntBASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Gm44651-201ENSMUST00000207343 372 ntBASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lhx9Q9WUH2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Gm14999-201ENSMUST00000121039 624 ntBASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Gm10312-201ENSMUST00000078515 489 ntBASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.78□□□□□ -0.52
Lhx9Q9WUH2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Lhx9Q9WUH2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lhx9Q9WUH2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lhx9Q9WUH2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lhx9Q9WUH2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lhx9Q9WUH2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lhx9Q9WUH2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lhx9Q9WUH2 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.77□□□□□ -0.52
Lhx9Q9WUH2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lhx9Q9WUH2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Lhx9Q9WUH2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lhx9Q9WUH2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms