Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RpgrQ9R0X5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RpgrQ9R0X5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
RpgrQ9R0X5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RpgrQ9R0X5 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RpgrQ9R0X5 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.65□□□□□ -0.39
RpgrQ9R0X5 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RpgrQ9R0X5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RpgrQ9R0X5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Gm37042-201ENSMUST00000193816 581 ntBASIC12.64□□□□□ -0.39
RpgrQ9R0X5 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Gm10268-201ENSMUST00000085340 555 ntBASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RpgrQ9R0X5 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.63□□□□□ -0.39
RpgrQ9R0X5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Gm19163-201ENSMUST00000223313 780 ntBASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RpgrQ9R0X5 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Gm12291-201ENSMUST00000121627 311 ntBASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Gm1335-201ENSMUST00000121653 386 ntBASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Gm17208-201ENSMUST00000168388 535 ntBASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Gm27731-201ENSMUST00000185192 107 ntBASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms