Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3a3Q9D554 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3a3Q9D554 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.53□□□□□ -0.4
Sf3a3Q9D554 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.52□□□□□ -0.4
Sf3a3Q9D554 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.52□□□□□ -0.4
Sf3a3Q9D554 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3a3Q9D554 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3a3Q9D554 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3a3Q9D554 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3a3Q9D554 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Gm25144-201ENSMUST00000179561 110 ntBASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Gm25352-201ENSMUST00000179815 110 ntBASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Gm9522-201ENSMUST00000182394 926 ntBASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Gm8000-201ENSMUST00000188378 592 ntBASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.52□□□□□ -0.41
Sf3a3Q9D554 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3a3Q9D554 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.51□□□□□ -0.41
Sf3a3Q9D554 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Gm11978-201ENSMUST00000122315 466 ntBASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3a3Q9D554 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms