Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.91□□□□□ -0.5
Khdc3Q9CWU5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Cog3-203ENSMUST00000227473 4197 ntBASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Gm24231-201ENSMUST00000104315 133 ntBASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Snora78-201ENSMUST00000158630 128 ntBASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Gm9630-201ENSMUST00000178304 885 ntBASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Gm5781-201ENSMUST00000219792 443 ntBASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Gm25857-201ENSMUST00000082788 129 ntBASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Khdc3Q9CWU5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.51
Khdc3Q9CWU5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Khdc3Q9CWU5 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.9□□□□□ -0.51
Khdc3Q9CWU5 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Khdc3Q9CWU5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Khdc3Q9CWU5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Gm27514-201ENSMUST00000183692 110 ntBASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms