Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.39□□□□□ -0.43
Trim33Q99PP7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.38□□□□□ -0.43
Trim33Q99PP7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.38□□□□□ -0.43
Trim33Q99PP7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Gm13392-201ENSMUST00000117708 150 ntBASIC12.38□□□□□ -0.43
Trim33Q99PP7 Gm13492-201ENSMUST00000119772 665 ntBASIC12.38□□□□□ -0.43
Trim33Q99PP7 Gm12502-201ENSMUST00000120197 444 ntBASIC12.38□□□□□ -0.43
Trim33Q99PP7 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.38□□□□□ -0.43
Trim33Q99PP7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Gm43133-201ENSMUST00000197472 463 ntBASIC12.38□□□□□ -0.43
Trim33Q99PP7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.38□□□□□ -0.43
Trim33Q99PP7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim33Q99PP7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.37□□□□□ -0.43
Trim33Q99PP7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.37□□□□□ -0.43
Trim33Q99PP7 Gm27572-201ENSMUST00000183702 255 ntBASIC12.37□□□□□ -0.43
Trim33Q99PP7 Gm18054-201ENSMUST00000207539 555 ntBASIC12.37□□□□□ -0.43
Trim33Q99PP7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Gm45880-201ENSMUST00000213041 853 ntBASIC12.37□□□□□ -0.43
Trim33Q99PP7 Gm19309-201ENSMUST00000218295 205 ntBASIC12.37□□□□□ -0.43
Trim33Q99PP7 Gm18363-201ENSMUST00000221671 730 ntBASIC12.37□□□□□ -0.43
Trim33Q99PP7 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.37□□□□□ -0.43
Trim33Q99PP7 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.37□□□□□ -0.43
Trim33Q99PP7 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.37□□□□□ -0.43
Trim33Q99PP7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.37□□□□□ -0.43
Trim33Q99PP7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim33Q99PP7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms