Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.31□□□□□ -0.6
Lims1Q99JW4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lims1Q99JW4 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Gm9083-201ENSMUST00000120423 819 ntBASIC11.3□□□□□ -0.6
Lims1Q99JW4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Gm26927-201ENSMUST00000182385 965 ntBASIC11.3□□□□□ -0.6
Lims1Q99JW4 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.3□□□□□ -0.6
Lims1Q99JW4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Gm7561-201ENSMUST00000211203 886 ntBASIC11.3□□□□□ -0.6
Lims1Q99JW4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.3□□□□□ -0.6
Lims1Q99JW4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.3□□□□□ -0.6
Lims1Q99JW4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.29□□□□□ -0.6
Lims1Q99JW4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Gm12314-201ENSMUST00000118104 538 ntBASIC11.29□□□□□ -0.6
Lims1Q99JW4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.29□□□□□ -0.6
Lims1Q99JW4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.29□□□□□ -0.6
Lims1Q99JW4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lims1Q99JW4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms