Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Gm24255-201ENSMUST00000104481 128 ntBASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Gm4034-201ENSMUST00000187674 480 ntBASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Gm10312-201ENSMUST00000078515 489 ntBASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha9Q91Y11 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Gm27390-201ENSMUST00000184516 176 ntBASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Gm9996-201ENSMUST00000070359 913 ntBASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms