Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Gm2383-201ENSMUST00000181461 807 ntBASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Mir339-201ENSMUST00000083659 96 ntBASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx41Q91VN6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Gm14921-201ENSMUST00000118643 908 ntBASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC14.25□□□□□ -0.13
Ddx41Q91VN6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms