Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TraipQ8VIG6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TraipQ8VIG6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
TraipQ8VIG6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TraipQ8VIG6 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TraipQ8VIG6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TraipQ8VIG6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TraipQ8VIG6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TraipQ8VIG6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.27□□□□□ -0.28
TraipQ8VIG6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TraipQ8VIG6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.27□□□□□ -0.29
TraipQ8VIG6 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Gm37102-201ENSMUST00000195740 1105 ntBASIC13.27□□□□□ -0.29
TraipQ8VIG6 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Gm18753-201ENSMUST00000201000 566 ntBASIC13.27□□□□□ -0.29
TraipQ8VIG6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Gm18730-201ENSMUST00000218038 343 ntBASIC13.27□□□□□ -0.29
TraipQ8VIG6 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.27□□□□□ -0.29
TraipQ8VIG6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TraipQ8VIG6 Gm45354-201ENSMUST00000199820 2557 ntBASIC13.27□□□□□ -0.29
TraipQ8VIG6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TraipQ8VIG6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Gm11989-201ENSMUST00000117240 672 ntBASIC13.26□□□□□ -0.29
TraipQ8VIG6 Gm14539-201ENSMUST00000117527 174 ntBASIC13.26□□□□□ -0.29
TraipQ8VIG6 Gm11362-201ENSMUST00000118838 850 ntBASIC13.26□□□□□ -0.29
TraipQ8VIG6 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.26□□□□□ -0.29
TraipQ8VIG6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.26□□□□□ -0.29
TraipQ8VIG6 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Gm27627-201ENSMUST00000183644 150 ntBASIC13.26□□□□□ -0.29
TraipQ8VIG6 Mir6927-201ENSMUST00000184494 71 ntBASIC13.26□□□□□ -0.29
TraipQ8VIG6 Gm43138-201ENSMUST00000199123 708 ntBASIC13.26□□□□□ -0.29
TraipQ8VIG6 Gm18711-201ENSMUST00000199341 750 ntBASIC13.26□□□□□ -0.29
TraipQ8VIG6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 AU022133-201ENSMUST00000200601 873 ntBASIC13.26□□□□□ -0.29
TraipQ8VIG6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.26□□□□□ -0.29
TraipQ8VIG6 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC13.26□□□□□ -0.29
TraipQ8VIG6 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.26□□□□□ -0.29
TraipQ8VIG6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TraipQ8VIG6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.25□□□□□ -0.29
TraipQ8VIG6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.25□□□□□ -0.29
TraipQ8VIG6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gm37373-201ENSMUST00000194005 2812 ntBASIC13.25□□□□□ -0.29
TraipQ8VIG6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms