Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Daam2-202ENSMUST00000224595 1926 ntBASIC12.41□□□□□ -0.42
Vps39Q8R5L3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Gm9022-201ENSMUST00000182482 992 ntBASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Gm45925-201ENSMUST00000218882 744 ntBASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.4□□□□□ -0.42
Vps39Q8R5L3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Gm12390-201ENSMUST00000117897 397 ntBASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps39Q8R5L3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.4□□□□□ -0.43
Vps39Q8R5L3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Vps39Q8R5L3 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.4□□□□□ -0.43
Vps39Q8R5L3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vps39Q8R5L3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vps39Q8R5L3 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms