Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Gm27486-201ENSMUST00000184923 80 ntBASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Gm9136-201ENSMUST00000193368 454 ntBASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Gm18584-201ENSMUST00000203098 964 ntBASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Gm11591-201ENSMUST00000120063 702 ntBASIC13.5□□□□□ -0.25
Sox30Q8CGW4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Gm42937-201ENSMUST00000197360 752 ntBASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Gm10268-201ENSMUST00000085340 555 ntBASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Gm6091-201ENSMUST00000098307 165 ntBASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox30Q8CGW4 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Gm16177-201ENSMUST00000120728 718 ntBASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Gm27847-201ENSMUST00000183711 107 ntBASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Gm27375-201ENSMUST00000183799 107 ntBASIC13.49□□□□□ -0.25
Sox30Q8CGW4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox30Q8CGW4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms