Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Gm12502-201ENSMUST00000120197 444 ntBASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Gm13315-201ENSMUST00000120376 991 ntBASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Gm6222-202ENSMUST00000182143 629 ntBASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Gm45930-201ENSMUST00000221330 292 ntBASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Snora73a-201ENSMUST00000082453 205 ntBASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.81□□□□□ -0.2
Ccdc38Q8CDN8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Gm22058-201ENSMUST00000083393 310 ntBASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 CT025681.1-201ENSMUST00000225453 1855 ntBASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms