Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp44Q8C2S0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp44Q8C2S0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp44Q8C2S0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Usp44Q8C2S0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp44Q8C2S0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Usp44Q8C2S0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp44Q8C2S0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Usp44Q8C2S0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Gm14247-201ENSMUST00000120950 237 ntBASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Gm18711-201ENSMUST00000199341 750 ntBASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Gm43822-201ENSMUST00000200285 476 ntBASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Gm10312-201ENSMUST00000078515 489 ntBASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp44Q8C2S0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Gm23912-201ENSMUST00000104687 87 ntBASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.46□□□□□ -0.09
Usp44Q8C2S0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp44Q8C2S0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Usp44Q8C2S0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Usp44Q8C2S0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Usp44Q8C2S0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp44Q8C2S0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Usp44Q8C2S0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Gm14109-201ENSMUST00000118814 309 ntBASIC14.45□□□□□ -0.1
Usp44Q8C2S0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Gm6963-201ENSMUST00000147879 379 ntBASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Gm44364-201ENSMUST00000198368 141 ntBASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms