Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Gm2553-201ENSMUST00000215986 605 ntBASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 AC136376.2-201ENSMUST00000228819 490 ntBASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC15.96■□□□□ 0.14
Col16a1Q8BLX7 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Gm5380-201ENSMUST00000119296 2136 ntBASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Gm25063-201ENSMUST00000104666 94 ntBASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Gm11422-201ENSMUST00000118925 1103 ntBASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Gm12030-201ENSMUST00000121917 223 ntBASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Ighv2-1-201ENSMUST00000170946 353 ntBASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Gm18059-201ENSMUST00000208073 580 ntBASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col16a1Q8BLX7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Mir671-201ENSMUST00000102432 98 ntBASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Gm13549-201ENSMUST00000118339 796 ntBASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Gm9116-201ENSMUST00000192400 1018 ntBASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col16a1Q8BLX7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gm23272-201ENSMUST00000104053 129 ntBASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gm25766-201ENSMUST00000104101 131 ntBASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gm15610-201ENSMUST00000120584 195 ntBASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms