Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Gm45784-201ENSMUST00000188360 142 ntBASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Gm44405-201ENSMUST00000198952 126 ntBASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc116Q80X53 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Gm22018-201ENSMUST00000104357 131 ntBASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Gm12314-201ENSMUST00000118104 538 ntBASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Gm9083-201ENSMUST00000120423 819 ntBASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Gm8227-201ENSMUST00000223306 571 ntBASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.15□□□□□ -0.46
Ccdc116Q80X53 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc116Q80X53 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc116Q80X53 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc116Q80X53 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc116Q80X53 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc116Q80X53 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 159 ms