Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Mir6958-201ENSMUST00000184207 73 ntBASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Gm10752-201ENSMUST00000218348 729 ntBASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Gzmn-202ENSMUST00000225535 989 ntBASIC14.34□□□□□ -0.11
Prpf40bQ80W14 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf40bQ80W14 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf40bQ80W14 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf40bQ80W14 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.33□□□□□ -0.11
Prpf40bQ80W14 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Prpf40bQ80W14 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.33□□□□□ -0.11
Prpf40bQ80W14 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf40bQ80W14 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.33□□□□□ -0.12
Prpf40bQ80W14 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Ntng1-201ENSMUST00000051253 327 ntBASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf40bQ80W14 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Rprl1-202ENSMUST00000198476 238 ntBASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms