Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gm15352-201ENSMUST00000118696 270 ntBASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gm11451-201ENSMUST00000118946 630 ntBASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gm25072-201ENSMUST00000175233 235 ntBASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gm28324-201ENSMUST00000187913 264 ntBASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gm44980-201ENSMUST00000205826 314 ntBASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gm45575-201ENSMUST00000210283 548 ntBASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx55Q6ZPL9 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.04□□□□□ -0.16
Ddx55Q6ZPL9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Gm11949-201ENSMUST00000117640 372 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Gm16071-201ENSMUST00000119589 793 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms