Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.66□□□□□ -0.06
Col11a2Q64739 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm12453-201ENSMUST00000121981 331 ntBASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm5700-201ENSMUST00000191483 989 ntBASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm43380-201ENSMUST00000200421 220 ntBASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm6450-201ENSMUST00000200896 574 ntBASIC14.66□□□□□ -0.06
Col11a2Q64739 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC14.66□□□□□ -0.06
Col11a2Q64739 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.65□□□□□ -0.06
Col11a2Q64739 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col11a2Q64739 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.65□□□□□ -0.06
Col11a2Q64739 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.65□□□□□ -0.06
Col11a2Q64739 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.65□□□□□ -0.06
Col11a2Q64739 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC14.65□□□□□ -0.06
Col11a2Q64739 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC14.65□□□□□ -0.06
Col11a2Q64739 Gm7719-201ENSMUST00000182374 975 ntBASIC14.65□□□□□ -0.06
Col11a2Q64739 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.65□□□□□ -0.06
Col11a2Q64739 Gm6390-201ENSMUST00000215034 589 ntBASIC14.65□□□□□ -0.06
Col11a2Q64739 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.65□□□□□ -0.06
Col11a2Q64739 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.65□□□□□ -0.06
Col11a2Q64739 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC14.65□□□□□ -0.06
Col11a2Q64739 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Col11a2Q64739 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a2Q64739 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Col11a2Q64739 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Col11a2Q64739 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Col11a2Q64739 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Col11a2Q64739 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC14.64□□□□□ -0.07
Col11a2Q64739 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Gm17825-201ENSMUST00000206836 794 ntBASIC14.64□□□□□ -0.07
Col11a2Q64739 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC14.64□□□□□ -0.07
Col11a2Q64739 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.64□□□□□ -0.07
Col11a2Q64739 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC14.64□□□□□ -0.07
Col11a2Q64739 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col11a2Q64739 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.64□□□□□ -0.07
Col11a2Q64739 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col11a2Q64739 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Col11a2Q64739 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col11a2Q64739 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col11a2Q64739 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col11a2Q64739 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.63□□□□□ -0.07
Col11a2Q64739 Gm5555-201ENSMUST00000120352 1111 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms