Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Irf4Q64287 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Irf4Q64287 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.18□□□□□ -0.46
Irf4Q64287 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Irf4Q64287 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Irf4Q64287 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.18□□□□□ -0.46
Irf4Q64287 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Irf4Q64287 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Irf4Q64287 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Irf4Q64287 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Irf4Q64287 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Irf4Q64287 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Irf4Q64287 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.17□□□□□ -0.46
Irf4Q64287 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.17□□□□□ -0.46
Irf4Q64287 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Irf4Q64287 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Gm14644-201ENSMUST00000116671 647 ntBASIC12.17□□□□□ -0.46
Irf4Q64287 Gm11439-201ENSMUST00000118598 409 ntBASIC12.17□□□□□ -0.46
Irf4Q64287 Gm14277-201ENSMUST00000121195 360 ntBASIC12.17□□□□□ -0.46
Irf4Q64287 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Irf4Q64287 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.17□□□□□ -0.46
Irf4Q64287 Gm27341-201ENSMUST00000183570 106 ntBASIC12.17□□□□□ -0.46
Irf4Q64287 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.17□□□□□ -0.46
Irf4Q64287 Gm32999-201ENSMUST00000192693 562 ntBASIC12.17□□□□□ -0.46
Irf4Q64287 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.17□□□□□ -0.46
Irf4Q64287 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.17□□□□□ -0.46
Irf4Q64287 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Irf4Q64287 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Irf4Q64287 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Irf4Q64287 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.17□□□□□ -0.46
Irf4Q64287 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Irf4Q64287 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Irf4Q64287 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Irf4Q64287 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.16□□□□□ -0.46
Irf4Q64287 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Irf4Q64287 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Irf4Q64287 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Irf4Q64287 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.16□□□□□ -0.46
Irf4Q64287 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Gm8913-201ENSMUST00000209491 641 ntBASIC12.16□□□□□ -0.46
Irf4Q64287 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.16□□□□□ -0.46
Irf4Q64287 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.16□□□□□ -0.46
Irf4Q64287 Gm19994-201ENSMUST00000217086 586 ntBASIC12.16□□□□□ -0.46
Irf4Q64287 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.16□□□□□ -0.46
Irf4Q64287 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.16□□□□□ -0.46
Irf4Q64287 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Irf4Q64287 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Irf4Q64287 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms