Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC9.44□□□□□ -0.9
Zfp248Q640N4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.44□□□□□ -0.9
Zfp248Q640N4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Zfp248Q640N4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.43□□□□□ -0.9
Zfp248Q640N4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Gm38092-201ENSMUST00000195600 653 ntBASIC9.43□□□□□ -0.9
Zfp248Q640N4 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.43□□□□□ -0.9
Zfp248Q640N4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Gm10268-201ENSMUST00000085340 555 ntBASIC9.43□□□□□ -0.9
Zfp248Q640N4 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.43□□□□□ -0.9
Zfp248Q640N4 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Zfp248Q640N4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.43□□□□□ -0.9
Zfp248Q640N4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Zfp248Q640N4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Gm7653-201ENSMUST00000214567 508 ntBASIC9.42□□□□□ -0.9
Zfp248Q640N4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Arhgef33-209ENSMUST00000225223 714 ntBASIC9.42□□□□□ -0.9
Zfp248Q640N4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms