Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Gm44882-201ENSMUST00000205702 802 ntBASIC12.9□□□□□ -0.34
Smarcd1Q61466 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.9□□□□□ -0.34
Smarcd1Q61466 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.9□□□□□ -0.34
Smarcd1Q61466 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Mir433-201ENSMUST00000093564 124 ntBASIC12.9□□□□□ -0.34
Smarcd1Q61466 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.9□□□□□ -0.34
Smarcd1Q61466 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd1Q61466 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Smarcd1Q61466 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Smarcd1Q61466 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Smarcd1Q61466 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Smarcd1Q61466 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Smarcd1Q61466 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.89□□□□□ -0.35
Smarcd1Q61466 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Gm29199-201ENSMUST00000187766 775 ntBASIC12.89□□□□□ -0.35
Smarcd1Q61466 Gm45224-201ENSMUST00000208203 414 ntBASIC12.89□□□□□ -0.35
Smarcd1Q61466 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.89□□□□□ -0.35
Smarcd1Q61466 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd1Q61466 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.88□□□□□ -0.35
Smarcd1Q61466 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.88□□□□□ -0.35
Smarcd1Q61466 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms