Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ClpbQ60649 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.92□□□□□ -0.5
ClpbQ60649 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
ClpbQ60649 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ClpbQ60649 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.92□□□□□ -0.5
ClpbQ60649 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.92□□□□□ -0.5
ClpbQ60649 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ClpbQ60649 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
ClpbQ60649 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
ClpbQ60649 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
ClpbQ60649 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
ClpbQ60649 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
ClpbQ60649 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
ClpbQ60649 Gm13297-201ENSMUST00000120205 934 ntBASIC11.92□□□□□ -0.5
ClpbQ60649 Gm9630-201ENSMUST00000178304 885 ntBASIC11.92□□□□□ -0.5
ClpbQ60649 Gm38158-201ENSMUST00000194617 339 ntBASIC11.92□□□□□ -0.5
ClpbQ60649 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.92□□□□□ -0.5
ClpbQ60649 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.92□□□□□ -0.5
ClpbQ60649 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.92□□□□□ -0.5
ClpbQ60649 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClpbQ60649 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.91□□□□□ -0.5
ClpbQ60649 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ClpbQ60649 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
ClpbQ60649 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Mir8109-201ENSMUST00000184375 117 ntBASIC11.91□□□□□ -0.5
ClpbQ60649 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.91□□□□□ -0.5
ClpbQ60649 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
ClpbQ60649 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.91□□□□□ -0.5
ClpbQ60649 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.91□□□□□ -0.5
ClpbQ60649 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
ClpbQ60649 Gm24526-201ENSMUST00000082921 158 ntBASIC11.91□□□□□ -0.5
ClpbQ60649 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
ClpbQ60649 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
ClpbQ60649 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ClpbQ60649 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ClpbQ60649 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.91□□□□□ -0.5
ClpbQ60649 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.91□□□□□ -0.5
ClpbQ60649 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClpbQ60649 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.91□□□□□ -0.5
ClpbQ60649 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.91□□□□□ -0.5
ClpbQ60649 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
ClpbQ60649 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ClpbQ60649 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.9□□□□□ -0.5
ClpbQ60649 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ClpbQ60649 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms