Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Gm25072-201ENSMUST00000175233 235 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Gm10774-201ENSMUST00000188689 204 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Gm3332-201ENSMUST00000189337 928 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Gm34023-201ENSMUST00000195539 217 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Gm9463-201ENSMUST00000206707 601 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Gm24934-201ENSMUST00000103764 111 ntBASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Gm11340-201ENSMUST00000119226 412 ntBASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Gm43184-201ENSMUST00000197247 542 ntBASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Gm5455-201ENSMUST00000058710 715 ntBASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Gm10288-201ENSMUST00000084614 537 ntBASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc85aQ5SP85 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc85aQ5SP85 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc85aQ5SP85 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc85aQ5SP85 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc85aQ5SP85 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc85aQ5SP85 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc85aQ5SP85 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.71□□□□□ -0.22
Ccdc85aQ5SP85 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc85aQ5SP85 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Gm23085-201ENSMUST00000157849 293 ntBASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Gm27530-201ENSMUST00000184096 98 ntBASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.7□□□□□ -0.22
Ccdc85aQ5SP85 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 477.6 ms