Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.65□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.65□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.65□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm22189-201ENSMUST00000103822 86 ntBASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm13616-201ENSMUST00000120600 222 ntBASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm15487-201ENSMUST00000122373 465 ntBASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Mir7684-201ENSMUST00000183858 60 ntBASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm27989-201ENSMUST00000184721 107 ntBASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm42929-201ENSMUST00000198374 1286 ntBASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm18307-201ENSMUST00000206864 949 ntBASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 AC156560.2-201ENSMUST00000221232 264 ntBASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm45195-201ENSMUST00000205597 1008 ntBASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms