Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.15□□□□□ -0.3
Col19a1Q0VF58 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.15□□□□□ -0.3
Col19a1Q0VF58 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col19a1Q0VF58 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col19a1Q0VF58 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.15□□□□□ -0.3
Col19a1Q0VF58 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col19a1Q0VF58 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col19a1Q0VF58 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.15□□□□□ -0.3
Col19a1Q0VF58 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col19a1Q0VF58 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.15□□□□□ -0.3
Col19a1Q0VF58 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col19a1Q0VF58 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col19a1Q0VF58 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col19a1Q0VF58 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col19a1Q0VF58 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.15□□□□□ -0.31
Col19a1Q0VF58 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Gm15003-201ENSMUST00000118884 446 ntBASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Gm12164-201ENSMUST00000121695 551 ntBASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Gm22146-201ENSMUST00000157397 288 ntBASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.14□□□□□ -0.31
Col19a1Q0VF58 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.14□□□□□ -0.31
Col19a1Q0VF58 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Gm16380-201ENSMUST00000077997 478 ntBASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Gm25007-201ENSMUST00000083808 133 ntBASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col19a1Q0VF58 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Gm20414-201ENSMUST00000172918 646 ntBASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Trav11n-201ENSMUST00000200113 343 ntBASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Gm14005-208ENSMUST00000223654 681 ntBASIC13.13□□□□□ -0.31
Col19a1Q0VF58 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.13□□□□□ -0.31
Col19a1Q0VF58 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col19a1Q0VF58 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms