Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC9.61□□□□□ -0.87
Cdx4Q07424 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.61□□□□□ -0.87
Cdx4Q07424 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.61□□□□□ -0.87
Cdx4Q07424 Gm7029-201ENSMUST00000173226 450 ntBASIC9.61□□□□□ -0.87
Cdx4Q07424 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.61□□□□□ -0.87
Cdx4Q07424 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC9.61□□□□□ -0.87
Cdx4Q07424 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.61□□□□□ -0.87
Cdx4Q07424 Gm19309-201ENSMUST00000218295 205 ntBASIC9.61□□□□□ -0.87
Cdx4Q07424 Gm9368-201ENSMUST00000219348 831 ntBASIC9.61□□□□□ -0.87
Cdx4Q07424 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Snora73a-201ENSMUST00000082453 205 ntBASIC9.61□□□□□ -0.87
Cdx4Q07424 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.61□□□□□ -0.87
Cdx4Q07424 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cdx4Q07424 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.61□□□□□ -0.87
Cdx4Q07424 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cdx4Q07424 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.61□□□□□ -0.87
Cdx4Q07424 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.61□□□□□ -0.87
Cdx4Q07424 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cdx4Q07424 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cdx4Q07424 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cdx4Q07424 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.6□□□□□ -0.87
Cdx4Q07424 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Gm14723-201ENSMUST00000118686 215 ntBASIC9.6□□□□□ -0.87
Cdx4Q07424 Gm11793-201ENSMUST00000120433 981 ntBASIC9.6□□□□□ -0.87
Cdx4Q07424 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Gm29396-201ENSMUST00000185659 716 ntBASIC9.6□□□□□ -0.87
Cdx4Q07424 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Gm37489-201ENSMUST00000191883 159 ntBASIC9.6□□□□□ -0.87
Cdx4Q07424 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.6□□□□□ -0.87
Cdx4Q07424 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.6□□□□□ -0.87
Cdx4Q07424 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.6□□□□□ -0.87
Cdx4Q07424 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cdx4Q07424 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.6□□□□□ -0.87
Cdx4Q07424 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Cdx4Q07424 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms