Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a1Q04857 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a1Q04857 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.72□□□□□ -0.21
Col6a1Q04857 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a1Q04857 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.72□□□□□ -0.21
Col6a1Q04857 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a1Q04857 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a1Q04857 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a1Q04857 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a1Q04857 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a1Q04857 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col6a1Q04857 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.71□□□□□ -0.21
Col6a1Q04857 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.71□□□□□ -0.21
Col6a1Q04857 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Col6a1Q04857 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Col6a1Q04857 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.71□□□□□ -0.21
Col6a1Q04857 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.71□□□□□ -0.21
Col6a1Q04857 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.71□□□□□ -0.21
Col6a1Q04857 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.71□□□□□ -0.21
Col6a1Q04857 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 Gm25951-201ENSMUST00000175330 64 ntBASIC13.71□□□□□ -0.21
Col6a1Q04857 Gm28882-201ENSMUST00000185504 314 ntBASIC13.71□□□□□ -0.21
Col6a1Q04857 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.71□□□□□ -0.21
Col6a1Q04857 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.71□□□□□ -0.21
Col6a1Q04857 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a1Q04857 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col6a1Q04857 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col6a1Q04857 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a1Q04857 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a1Q04857 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.22
Col6a1Q04857 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a1Q04857 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a1Q04857 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a1Q04857 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a1Q04857 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.7□□□□□ -0.22
Col6a1Q04857 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col6a1Q04857 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Col6a1Q04857 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Col6a1Q04857 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col6a1Q04857 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col6a1Q04857 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Mir6546-201ENSMUST00000184460 62 ntBASIC13.7□□□□□ -0.22
Col6a1Q04857 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.7□□□□□ -0.22
Col6a1Q04857 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.7□□□□□ -0.22
Col6a1Q04857 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.7□□□□□ -0.22
Col6a1Q04857 Gm37905-201ENSMUST00000195310 341 ntBASIC13.7□□□□□ -0.22
Col6a1Q04857 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.7□□□□□ -0.22
Col6a1Q04857 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.7□□□□□ -0.22
Col6a1Q04857 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Col6a1Q04857 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col6a1Q04857 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Col6a1Q04857 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a1Q04857 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a1Q04857 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a1Q04857 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.69□□□□□ -0.22
Col6a1Q04857 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a1Q04857 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a1Q04857 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Col6a1Q04857 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a1Q04857 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a1Q04857 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a1Q04857 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.69□□□□□ -0.22
Col6a1Q04857 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a1Q04857 Gm11340-201ENSMUST00000119226 412 ntBASIC13.69□□□□□ -0.22
Col6a1Q04857 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a1Q04857 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.69□□□□□ -0.22
Col6a1Q04857 Gm9358-201ENSMUST00000183067 927 ntBASIC13.69□□□□□ -0.22
Col6a1Q04857 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms