Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.61□□□□□ -0.71
Col8a1Q00780 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.61□□□□□ -0.71
Col8a1Q00780 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.61□□□□□ -0.71
Col8a1Q00780 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a1Q00780 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a1Q00780 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a1Q00780 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a1Q00780 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Col8a1Q00780 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.61□□□□□ -0.71
Col8a1Q00780 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a1Q00780 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Col8a1Q00780 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a1Q00780 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Col8a1Q00780 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a1Q00780 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a1Q00780 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.61□□□□□ -0.71
Col8a1Q00780 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.6□□□□□ -0.71
Col8a1Q00780 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Col8a1Q00780 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Col8a1Q00780 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Col8a1Q00780 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC10.6□□□□□ -0.71
Col8a1Q00780 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.6□□□□□ -0.71
Col8a1Q00780 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
Col8a1Q00780 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Col8a1Q00780 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.6□□□□□ -0.71
Col8a1Q00780 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Col8a1Q00780 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.6□□□□□ -0.71
Col8a1Q00780 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.6□□□□□ -0.71
Col8a1Q00780 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.6□□□□□ -0.71
Col8a1Q00780 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Col8a1Q00780 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Col8a1Q00780 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.6□□□□□ -0.71
Col8a1Q00780 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a1Q00780 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Col8a1Q00780 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Col8a1Q00780 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.59□□□□□ -0.71
Col8a1Q00780 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm15573-201ENSMUST00000119487 540 ntBASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm5616-201ENSMUST00000165252 384 ntBASIC10.59□□□□□ -0.71
Col8a1Q00780 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm8741-201ENSMUST00000174736 384 ntBASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm23153-201ENSMUST00000175323 313 ntBASIC10.59□□□□□ -0.71
Col8a1Q00780 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm18558-201ENSMUST00000186253 1214 ntBASIC10.59□□□□□ -0.71
Col8a1Q00780 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.59□□□□□ -0.71
Col8a1Q00780 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm19187-201ENSMUST00000206781 892 ntBASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm45550-201ENSMUST00000209380 946 ntBASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm9132-201ENSMUST00000210182 832 ntBASIC10.59□□□□□ -0.71
Col8a1Q00780 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.59□□□□□ -0.71
Col8a1Q00780 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms