Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.05□□□□□ -0.64
H3f3aP84244 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
H3f3aP84244 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
H3f3aP84244 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.05□□□□□ -0.64
H3f3aP84244 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.05□□□□□ -0.64
H3f3aP84244 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.05□□□□□ -0.64
H3f3aP84244 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
H3f3aP84244 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
H3f3aP84244 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.05□□□□□ -0.64
H3f3aP84244 Gm38266-201ENSMUST00000194931 421 ntBASIC11.05□□□□□ -0.64
H3f3aP84244 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Gm45865-201ENSMUST00000211815 945 ntBASIC11.05□□□□□ -0.64
H3f3aP84244 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.05□□□□□ -0.64
H3f3aP84244 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.05□□□□□ -0.64
H3f3aP84244 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.05□□□□□ -0.64
H3f3aP84244 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
H3f3aP84244 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.05□□□□□ -0.64
H3f3aP84244 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
H3f3aP84244 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
H3f3aP84244 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.05□□□□□ -0.64
H3f3aP84244 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.04□□□□□ -0.64
H3f3aP84244 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.04□□□□□ -0.64
H3f3aP84244 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
H3f3aP84244 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
H3f3aP84244 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
H3f3aP84244 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
H3f3aP84244 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Gm2991-201ENSMUST00000173338 480 ntBASIC11.04□□□□□ -0.64
H3f3aP84244 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.04□□□□□ -0.64
H3f3aP84244 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Gm28882-201ENSMUST00000185504 314 ntBASIC11.04□□□□□ -0.64
H3f3aP84244 Gm42937-201ENSMUST00000197360 752 ntBASIC11.04□□□□□ -0.64
H3f3aP84244 Gm44958-201ENSMUST00000203734 736 ntBASIC11.04□□□□□ -0.64
H3f3aP84244 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
H3f3aP84244 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.04□□□□□ -0.64
H3f3aP84244 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
H3f3aP84244 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms