Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.34□□□□□ -0.43
Ldb1P70662 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ldb1P70662 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ldb1P70662 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ldb1P70662 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ldb1P70662 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.34□□□□□ -0.43
Ldb1P70662 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ldb1P70662 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.34□□□□□ -0.43
Ldb1P70662 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ldb1P70662 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.33□□□□□ -0.44
Ldb1P70662 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ldb1P70662 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.33□□□□□ -0.44
Ldb1P70662 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ldb1P70662 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ldb1P70662 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Gm4986-201ENSMUST00000119731 549 ntBASIC12.33□□□□□ -0.44
Ldb1P70662 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.33□□□□□ -0.44
Ldb1P70662 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Gm18304-201ENSMUST00000189162 546 ntBASIC12.33□□□□□ -0.44
Ldb1P70662 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.33□□□□□ -0.44
Ldb1P70662 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Gm19309-201ENSMUST00000218295 205 ntBASIC12.33□□□□□ -0.44
Ldb1P70662 Gm45930-201ENSMUST00000221330 292 ntBASIC12.33□□□□□ -0.44
Ldb1P70662 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Ldb1P70662 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ldb1P70662 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ldb1P70662 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.33□□□□□ -0.44
Ldb1P70662 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb1P70662 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.32□□□□□ -0.44
Ldb1P70662 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.32□□□□□ -0.44
Ldb1P70662 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.32□□□□□ -0.44
Ldb1P70662 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.32□□□□□ -0.44
Ldb1P70662 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.32□□□□□ -0.44
Ldb1P70662 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ldb1P70662 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ldb1P70662 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ldb1P70662 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ldb1P70662 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.32□□□□□ -0.44
Ldb1P70662 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Gm13342-201ENSMUST00000121055 207 ntBASIC12.32□□□□□ -0.44
Ldb1P70662 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Ldb1P70662 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.32□□□□□ -0.44
Ldb1P70662 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.32□□□□□ -0.44
Ldb1P70662 Gm6007-201ENSMUST00000208170 823 ntBASIC12.32□□□□□ -0.44
Ldb1P70662 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.32□□□□□ -0.44
Ldb1P70662 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ldb1P70662 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ldb1P70662 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.32□□□□□ -0.44
Ldb1P70662 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ldb1P70662 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.32□□□□□ -0.44
Ldb1P70662 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.32□□□□□ -0.44
Ldb1P70662 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms