Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.46□□□□□ -0.09
Usp5P56399 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp5P56399 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp5P56399 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp5P56399 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp5P56399 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp5P56399 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp5P56399 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp5P56399 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.46□□□□□ -0.1
Usp5P56399 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp5P56399 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.46□□□□□ -0.1
Usp5P56399 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp5P56399 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp5P56399 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp5P56399 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp5P56399 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Usp5P56399 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.45□□□□□ -0.1
Usp5P56399 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.45□□□□□ -0.1
Usp5P56399 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.45□□□□□ -0.1
Usp5P56399 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp5P56399 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.45□□□□□ -0.1
Usp5P56399 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.45□□□□□ -0.1
Usp5P56399 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.45□□□□□ -0.1
Usp5P56399 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp5P56399 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp5P56399 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp5P56399 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp5P56399 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.45□□□□□ -0.1
Usp5P56399 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.44□□□□□ -0.1
Usp5P56399 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.44□□□□□ -0.1
Usp5P56399 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Usp5P56399 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Gm14760-201ENSMUST00000121831 999 ntBASIC14.44□□□□□ -0.1
Usp5P56399 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Usp5P56399 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp5P56399 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp5P56399 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.44□□□□□ -0.1
Usp5P56399 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.44□□□□□ -0.1
Usp5P56399 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.44□□□□□ -0.1
Usp5P56399 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.44□□□□□ -0.1
Usp5P56399 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp5P56399 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.44□□□□□ -0.1
Usp5P56399 Mir433-201ENSMUST00000093564 124 ntBASIC14.44□□□□□ -0.1
Usp5P56399 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp5P56399 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.44□□□□□ -0.1
Usp5P56399 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp5P56399 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp5P56399 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp5P56399 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp5P56399 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp5P56399 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Usp5P56399 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp5P56399 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp5P56399 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp5P56399 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp5P56399 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp5P56399 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms