Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rrp1P56183 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.97□□□□□ -0.17
Rrp1P56183 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.97□□□□□ -0.17
Rrp1P56183 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Rrp1P56183 Gm4984-201ENSMUST00000115987 360 ntBASIC13.97□□□□□ -0.17
Rrp1P56183 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.97□□□□□ -0.17
Rrp1P56183 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.97□□□□□ -0.17
Rrp1P56183 Gm43433-201ENSMUST00000196573 481 ntBASIC13.97□□□□□ -0.17
Rrp1P56183 Gm29705-201ENSMUST00000212598 474 ntBASIC13.97□□□□□ -0.17
Rrp1P56183 Gm17794-201ENSMUST00000220252 955 ntBASIC13.97□□□□□ -0.17
Rrp1P56183 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.97□□□□□ -0.17
Rrp1P56183 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.97□□□□□ -0.17
Rrp1P56183 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Rrp1P56183 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rrp1P56183 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rrp1P56183 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rrp1P56183 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Rrp1P56183 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rrp1P56183 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.96□□□□□ -0.17
Rrp1P56183 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.96□□□□□ -0.17
Rrp1P56183 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Gm15824-201ENSMUST00000119516 955 ntBASIC13.96□□□□□ -0.17
Rrp1P56183 Mir1894-201ENSMUST00000122802 81 ntBASIC13.96□□□□□ -0.17
Rrp1P56183 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.96□□□□□ -0.17
Rrp1P56183 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.96□□□□□ -0.17
Rrp1P56183 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rrp1P56183 Gm8652-201ENSMUST00000181363 964 ntBASIC13.96□□□□□ -0.17
Rrp1P56183 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.96□□□□□ -0.17
Rrp1P56183 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.96□□□□□ -0.17
Rrp1P56183 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.96□□□□□ -0.17
Rrp1P56183 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.96□□□□□ -0.17
Rrp1P56183 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rrp1P56183 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rrp1P56183 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.96□□□□□ -0.18
Rrp1P56183 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.96□□□□□ -0.18
Rrp1P56183 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rrp1P56183 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rrp1P56183 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Rrp1P56183 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rrp1P56183 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.95□□□□□ -0.18
Rrp1P56183 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.95□□□□□ -0.18
Rrp1P56183 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Gm13315-201ENSMUST00000120376 991 ntBASIC13.95□□□□□ -0.18
Rrp1P56183 Gm22331-201ENSMUST00000158066 136 ntBASIC13.95□□□□□ -0.18
Rrp1P56183 Gm27839-201ENSMUST00000184242 106 ntBASIC13.95□□□□□ -0.18
Rrp1P56183 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.95□□□□□ -0.18
Rrp1P56183 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rrp1P56183 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Rrp1P56183 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rrp1P56183 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms