Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.21□□□□□ -0.29
NrlP54846 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
NrlP54846 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Gm9550-201ENSMUST00000161130 862 ntBASIC13.21□□□□□ -0.29
NrlP54846 Gm27627-201ENSMUST00000183644 150 ntBASIC13.21□□□□□ -0.29
NrlP54846 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.21□□□□□ -0.29
NrlP54846 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.21□□□□□ -0.29
NrlP54846 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.21□□□□□ -0.29
NrlP54846 Spcs1-203ENSMUST00000226374 592 ntBASIC13.21□□□□□ -0.29
NrlP54846 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NrlP54846 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.21□□□□□ -0.29
NrlP54846 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NrlP54846 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
NrlP54846 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NrlP54846 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.21□□□□□ -0.3
NrlP54846 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NrlP54846 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
NrlP54846 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NrlP54846 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NrlP54846 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NrlP54846 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
NrlP54846 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
NrlP54846 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.2□□□□□ -0.3
NrlP54846 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
NrlP54846 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NrlP54846 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.2□□□□□ -0.3
NrlP54846 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NrlP54846 Gm9062-201ENSMUST00000117712 727 ntBASIC13.2□□□□□ -0.3
NrlP54846 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.2□□□□□ -0.3
NrlP54846 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.2□□□□□ -0.3
NrlP54846 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.2□□□□□ -0.3
NrlP54846 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NrlP54846 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.2□□□□□ -0.3
NrlP54846 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
NrlP54846 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.2□□□□□ -0.3
NrlP54846 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.2□□□□□ -0.3
NrlP54846 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.2□□□□□ -0.3
NrlP54846 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.2□□□□□ -0.3
NrlP54846 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.2□□□□□ -0.3
NrlP54846 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.2□□□□□ -0.3
NrlP54846 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.2□□□□□ -0.3
NrlP54846 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NrlP54846 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NrlP54846 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NrlP54846 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
NrlP54846 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.19□□□□□ -0.3
NrlP54846 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NrlP54846 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NrlP54846 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NrlP54846 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NrlP54846 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.19□□□□□ -0.3
NrlP54846 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.19□□□□□ -0.3
NrlP54846 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NrlP54846 Gm23699-201ENSMUST00000158835 135 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms