Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pdx1P52946 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pdx1P52946 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.26□□□□□ -0.45
Pdx1P52946 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.26□□□□□ -0.45
Pdx1P52946 Gm30285-201ENSMUST00000214614 422 ntBASIC12.26□□□□□ -0.45
Pdx1P52946 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.26□□□□□ -0.45
Pdx1P52946 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.26□□□□□ -0.45
Pdx1P52946 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.26□□□□□ -0.45
Pdx1P52946 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pdx1P52946 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pdx1P52946 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Pdx1P52946 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pdx1P52946 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.26□□□□□ -0.45
Pdx1P52946 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pdx1P52946 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdx1P52946 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pdx1P52946 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdx1P52946 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pdx1P52946 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pdx1P52946 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pdx1P52946 Gm24845-201ENSMUST00000158034 109 ntBASIC12.25□□□□□ -0.45
Pdx1P52946 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.25□□□□□ -0.45
Pdx1P52946 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.25□□□□□ -0.45
Pdx1P52946 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdx1P52946 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.25□□□□□ -0.45
Pdx1P52946 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pdx1P52946 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pdx1P52946 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.25□□□□□ -0.45
Pdx1P52946 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdx1P52946 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pdx1P52946 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdx1P52946 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Pdx1P52946 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.24□□□□□ -0.45
Pdx1P52946 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pdx1P52946 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Pdx1P52946 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.24□□□□□ -0.45
Pdx1P52946 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.24□□□□□ -0.45
Pdx1P52946 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Pdx1P52946 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.24□□□□□ -0.45
Pdx1P52946 Gm28882-201ENSMUST00000185504 314 ntBASIC12.24□□□□□ -0.45
Pdx1P52946 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pdx1P52946 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.24□□□□□ -0.45
Pdx1P52946 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.24□□□□□ -0.45
Pdx1P52946 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pdx1P52946 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms