Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.27□□□□□ -0.77
Nkx2-1P50220 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Gm16372-201ENSMUST00000073088 450 ntBASIC10.27□□□□□ -0.77
Nkx2-1P50220 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.26□□□□□ -0.77
Nkx2-1P50220 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.26□□□□□ -0.77
Nkx2-1P50220 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm7488-201ENSMUST00000117148 684 ntBASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm14760-201ENSMUST00000121831 999 ntBASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.26□□□□□ -0.77
Nkx2-1P50220 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Itm2b-204ENSMUST00000228637 783 ntBASIC10.26□□□□□ -0.77
Nkx2-1P50220 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-1P50220 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.25□□□□□ -0.77
Nkx2-1P50220 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.25□□□□□ -0.77
Nkx2-1P50220 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-1P50220 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx2-1P50220 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms