Protein–RNA interactions for Protein: P47963

Rpl13, 60S ribosomal protein L13, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13P47963 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rpl13P47963 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.58□□□□□ -0.24
Rpl13P47963 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.58□□□□□ -0.24
Rpl13P47963 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpl13P47963 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.57□□□□□ -0.24
Rpl13P47963 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpl13P47963 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rpl13P47963 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Gm22018-201ENSMUST00000104357 131 ntBASIC13.57□□□□□ -0.24
Rpl13P47963 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Rpl13P47963 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Gm37424-201ENSMUST00000191727 561 ntBASIC13.57□□□□□ -0.24
Rpl13P47963 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.57□□□□□ -0.24
Rpl13P47963 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.57□□□□□ -0.24
Rpl13P47963 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpl13P47963 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.57□□□□□ -0.24
Rpl13P47963 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.57□□□□□ -0.24
Rpl13P47963 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rpl13P47963 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpl13P47963 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.57□□□□□ -0.24
Rpl13P47963 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.57□□□□□ -0.24
Rpl13P47963 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rpl13P47963 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Rpl13P47963 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpl13P47963 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpl13P47963 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Rpl13P47963 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.56□□□□□ -0.24
Rpl13P47963 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Gm23119-201ENSMUST00000158610 140 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 Gm27390-201ENSMUST00000184516 176 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 Gm43133-201ENSMUST00000197472 463 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.56□□□□□ -0.24
Rpl13P47963 Gm44958-201ENSMUST00000203734 736 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 Gm44882-201ENSMUST00000205702 802 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.56□□□□□ -0.24
Rpl13P47963 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpl13P47963 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms