Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.96□□□□□ -0.49
Tnfsf4P43488 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Gm13492-201ENSMUST00000119772 665 ntBASIC11.96□□□□□ -0.49
Tnfsf4P43488 Gm15806-201ENSMUST00000120696 955 ntBASIC11.96□□□□□ -0.49
Tnfsf4P43488 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Gm35960-201ENSMUST00000202712 767 ntBASIC11.96□□□□□ -0.49
Tnfsf4P43488 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.96□□□□□ -0.5
Tnfsf4P43488 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf4P43488 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Tnfsf4P43488 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf4P43488 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf4P43488 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf4P43488 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf4P43488 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf4P43488 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Tnfsf4P43488 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf4P43488 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.95□□□□□ -0.5
Tnfsf4P43488 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm27847-201ENSMUST00000183711 107 ntBASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm27375-201ENSMUST00000183799 107 ntBASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm27243-201ENSMUST00000183964 521 ntBASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm44882-201ENSMUST00000205702 802 ntBASIC11.95□□□□□ -0.5
Tnfsf4P43488 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.95□□□□□ -0.5
Tnfsf4P43488 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.95□□□□□ -0.5
Tnfsf4P43488 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf4P43488 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.94□□□□□ -0.5
Tnfsf4P43488 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms