Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.12□□□□□ -0.15
Lig1P37913 Gm24514-201ENSMUST00000174961 285 ntBASIC14.12□□□□□ -0.15
Lig1P37913 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.12□□□□□ -0.15
Lig1P37913 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.12□□□□□ -0.15
Lig1P37913 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lig1P37913 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lig1P37913 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lig1P37913 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lig1P37913 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lig1P37913 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lig1P37913 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Lig1P37913 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Lig1P37913 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Lig1P37913 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lig1P37913 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.12□□□□□ -0.15
Lig1P37913 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lig1P37913 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.12□□□□□ -0.15
Lig1P37913 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lig1P37913 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.12□□□□□ -0.15
Lig1P37913 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Gm9062-201ENSMUST00000117712 727 ntBASIC14.11□□□□□ -0.15
Lig1P37913 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.11□□□□□ -0.15
Lig1P37913 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.11□□□□□ -0.15
Lig1P37913 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.11□□□□□ -0.15
Lig1P37913 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.11□□□□□ -0.15
Lig1P37913 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.11□□□□□ -0.15
Lig1P37913 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.11□□□□□ -0.15
Lig1P37913 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 Gm5523-201ENSMUST00000180415 997 ntBASIC14.11□□□□□ -0.15
Lig1P37913 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.11□□□□□ -0.15
Lig1P37913 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Lig1P37913 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lig1P37913 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lig1P37913 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig1P37913 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig1P37913 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig1P37913 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lig1P37913 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig1P37913 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.1□□□□□ -0.15
Lig1P37913 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lig1P37913 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Lig1P37913 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig1P37913 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lig1P37913 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Lig1P37913 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.1□□□□□ -0.15
Lig1P37913 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig1P37913 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.1□□□□□ -0.15
Lig1P37913 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lig1P37913 Gm12380-201ENSMUST00000119012 544 ntBASIC14.1□□□□□ -0.15
Lig1P37913 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.1□□□□□ -0.15
Lig1P37913 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Lig1P37913 Gm20426-201ENSMUST00000173657 440 ntBASIC14.1□□□□□ -0.15
Lig1P37913 Gm44958-201ENSMUST00000203734 736 ntBASIC14.1□□□□□ -0.15
Lig1P37913 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.1□□□□□ -0.15
Lig1P37913 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Lig1P37913 Gm19994-201ENSMUST00000217086 586 ntBASIC14.1□□□□□ -0.15
Lig1P37913 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.1□□□□□ -0.15
Lig1P37913 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.1□□□□□ -0.15
Lig1P37913 Spcs1-203ENSMUST00000226374 592 ntBASIC14.1□□□□□ -0.15
Lig1P37913 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lig1P37913 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lig1P37913 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lig1P37913 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig1P37913 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lig1P37913 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig1P37913 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.1□□□□□ -0.15
Lig1P37913 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig1P37913 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Lig1P37913 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig1P37913 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms