Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.38□□□□□ -0.43
Nckap1P28660 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nckap1P28660 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nckap1P28660 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nckap1P28660 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nckap1P28660 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.38□□□□□ -0.43
Nckap1P28660 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nckap1P28660 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nckap1P28660 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nckap1P28660 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.37□□□□□ -0.43
Nckap1P28660 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nckap1P28660 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.37□□□□□ -0.43
Nckap1P28660 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.37□□□□□ -0.43
Nckap1P28660 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nckap1P28660 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm29615-201ENSMUST00000185371 697 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm28224-201ENSMUST00000186078 697 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm29001-201ENSMUST00000186177 697 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm28292-201ENSMUST00000186593 697 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm28101-201ENSMUST00000187608 697 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm29076-201ENSMUST00000187689 697 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm28302-201ENSMUST00000187931 697 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm28646-201ENSMUST00000188220 697 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm28205-201ENSMUST00000189177 697 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm29032-201ENSMUST00000189797 697 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm28695-201ENSMUST00000190300 697 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm37448-201ENSMUST00000192795 697 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.37□□□□□ -0.43
Nckap1P28660 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.37□□□□□ -0.43
Nckap1P28660 Gm18730-201ENSMUST00000218038 343 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.37□□□□□ -0.43
Nckap1P28660 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nckap1P28660 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.37□□□□□ -0.43
Nckap1P28660 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Nckap1P28660 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.37□□□□□ -0.43
Nckap1P28660 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nckap1P28660 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Nckap1P28660 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nckap1P28660 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Nckap1P28660 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nckap1P28660 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.36□□□□□ -0.43
Nckap1P28660 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nckap1P28660 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.36□□□□□ -0.43
Nckap1P28660 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
Nckap1P28660 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.36□□□□□ -0.43
Nckap1P28660 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.36□□□□□ -0.43
Nckap1P28660 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms