Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.06□□□□□ -0.8
Cdx1P18111 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.06□□□□□ -0.8
Cdx1P18111 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx1P18111 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Cdx1P18111 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx1P18111 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.06□□□□□ -0.8
Cdx1P18111 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cdx1P18111 Mir1894-201ENSMUST00000122802 81 ntBASIC10.06□□□□□ -0.8
Cdx1P18111 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.06□□□□□ -0.8
Cdx1P18111 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx1P18111 Gm27390-201ENSMUST00000184516 176 ntBASIC10.06□□□□□ -0.8
Cdx1P18111 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.06□□□□□ -0.8
Cdx1P18111 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.06□□□□□ -0.8
Cdx1P18111 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.06□□□□□ -0.8
Cdx1P18111 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cdx1P18111 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Cdx1P18111 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cdx1P18111 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.06□□□□□ -0.8
Cdx1P18111 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.06□□□□□ -0.8
Cdx1P18111 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.06□□□□□ -0.8
Cdx1P18111 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx1P18111 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.06□□□□□ -0.8
Cdx1P18111 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx1P18111 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.05□□□□□ -0.8
Cdx1P18111 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cdx1P18111 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.05□□□□□ -0.8
Cdx1P18111 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.05□□□□□ -0.8
Cdx1P18111 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.05□□□□□ -0.8
Cdx1P18111 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.05□□□□□ -0.8
Cdx1P18111 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.05□□□□□ -0.8
Cdx1P18111 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.05□□□□□ -0.8
Cdx1P18111 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.05□□□□□ -0.8
Cdx1P18111 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Cdx1P18111 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.05□□□□□ -0.8
Cdx1P18111 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cdx1P18111 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Cdx1P18111 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Cdx1P18111 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.05□□□□□ -0.8
Cdx1P18111 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.05□□□□□ -0.8
Cdx1P18111 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.05□□□□□ -0.8
Cdx1P18111 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx1P18111 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms