Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.8□□□□□ -0.68
UbbP0CG49 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.79□□□□□ -0.68
UbbP0CG49 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.79□□□□□ -0.68
UbbP0CG49 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UbbP0CG49 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.79□□□□□ -0.68
UbbP0CG49 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
UbbP0CG49 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Gm13612-201ENSMUST00000119276 390 ntBASIC10.79□□□□□ -0.68
UbbP0CG49 Gm13123-201ENSMUST00000122173 492 ntBASIC10.79□□□□□ -0.68
UbbP0CG49 Gm2231-201ENSMUST00000125661 612 ntBASIC10.79□□□□□ -0.68
UbbP0CG49 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.79□□□□□ -0.68
UbbP0CG49 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.79□□□□□ -0.68
UbbP0CG49 Gm26185-201ENSMUST00000157692 266 ntBASIC10.79□□□□□ -0.68
UbbP0CG49 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.79□□□□□ -0.68
UbbP0CG49 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UbbP0CG49 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
UbbP0CG49 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
UbbP0CG49 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.79□□□□□ -0.68
UbbP0CG49 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UbbP0CG49 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.79□□□□□ -0.68
UbbP0CG49 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UbbP0CG49 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.79□□□□□ -0.68
UbbP0CG49 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
UbbP0CG49 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
UbbP0CG49 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.78□□□□□ -0.68
UbbP0CG49 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.78□□□□□ -0.68
UbbP0CG49 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.78□□□□□ -0.68
UbbP0CG49 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
UbbP0CG49 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.78□□□□□ -0.68
UbbP0CG49 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
UbbP0CG49 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
UbbP0CG49 Gm37042-201ENSMUST00000193816 581 ntBASIC10.78□□□□□ -0.68
UbbP0CG49 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.78□□□□□ -0.68
UbbP0CG49 Gm8463-201ENSMUST00000208573 613 ntBASIC10.78□□□□□ -0.68
UbbP0CG49 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.78□□□□□ -0.68
UbbP0CG49 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.78□□□□□ -0.68
UbbP0CG49 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
UbbP0CG49 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
UbbP0CG49 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
UbbP0CG49 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.78□□□□□ -0.68
UbbP0CG49 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.78□□□□□ -0.68
UbbP0CG49 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
UbbP0CG49 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UbbP0CG49 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
UbbP0CG49 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.77□□□□□ -0.68
UbbP0CG49 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UbbP0CG49 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UbbP0CG49 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms