Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Gm15352-201ENSMUST00000118696 270 ntBASIC13.12□□□□□ -0.31
Hoxc8P09025 Gm14585-201ENSMUST00000120713 634 ntBASIC13.12□□□□□ -0.31
Hoxc8P09025 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.12□□□□□ -0.31
Hoxc8P09025 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Mir8115-201ENSMUST00000184992 119 ntBASIC13.12□□□□□ -0.31
Hoxc8P09025 Gm4034-201ENSMUST00000187674 480 ntBASIC13.12□□□□□ -0.31
Hoxc8P09025 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Snora73b-201ENSMUST00000083419 205 ntBASIC13.12□□□□□ -0.31
Hoxc8P09025 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.12□□□□□ -0.31
Hoxc8P09025 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.11□□□□□ -0.31
Hoxc8P09025 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Hoxc8P09025 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Hoxc8P09025 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hoxc8P09025 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.11□□□□□ -0.31
Hoxc8P09025 Gm8731-201ENSMUST00000118088 412 ntBASIC13.11□□□□□ -0.31
Hoxc8P09025 Gm13888-201ENSMUST00000119148 422 ntBASIC13.11□□□□□ -0.31
Hoxc8P09025 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.11□□□□□ -0.31
Hoxc8P09025 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.11□□□□□ -0.31
Hoxc8P09025 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.11□□□□□ -0.31
Hoxc8P09025 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.11□□□□□ -0.31
Hoxc8P09025 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.11□□□□□ -0.31
Hoxc8P09025 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Gm9132-201ENSMUST00000210182 832 ntBASIC13.11□□□□□ -0.31
Hoxc8P09025 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.11□□□□□ -0.31
Hoxc8P09025 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.11□□□□□ -0.31
Hoxc8P09025 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.11□□□□□ -0.31
Hoxc8P09025 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hoxc8P09025 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.11□□□□□ -0.31
Hoxc8P09025 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc8P09025 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.11□□□□□ -0.31
Hoxc8P09025 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Hoxc8P09025 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hoxc8P09025 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Hoxc8P09025 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Gm4726-201ENSMUST00000135604 736 ntBASIC13.1□□□□□ -0.31
Hoxc8P09025 Gm6019-201ENSMUST00000148369 736 ntBASIC13.1□□□□□ -0.31
Hoxc8P09025 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.1□□□□□ -0.31
Hoxc8P09025 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.1□□□□□ -0.31
Hoxc8P09025 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.1□□□□□ -0.31
Hoxc8P09025 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms