Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Col4a1P02463 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.94□□□□□ -0.02
Col4a1P02463 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.94□□□□□ -0.02
Col4a1P02463 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.94□□□□□ -0.02
Col4a1P02463 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.94□□□□□ -0.02
Col4a1P02463 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Gm12795-201ENSMUST00000117594 539 ntBASIC14.93□□□□□ -0.02
Col4a1P02463 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.93□□□□□ -0.02
Col4a1P02463 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.93□□□□□ -0.02
Col4a1P02463 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.93□□□□□ -0.02
Col4a1P02463 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
Col4a1P02463 Gm9630-201ENSMUST00000178304 885 ntBASIC14.93□□□□□ -0.02
Col4a1P02463 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Col4a1P02463 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col4a1P02463 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col4a1P02463 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col4a1P02463 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Col4a1P02463 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.93□□□□□ -0.02
Col4a1P02463 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col4a1P02463 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col4a1P02463 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col4a1P02463 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Col4a1P02463 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.93□□□□□ -0.02
Col4a1P02463 Gm8459-201ENSMUST00000162504 760 ntBASIC14.93□□□□□ -0.02
Col4a1P02463 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.93□□□□□ -0.02
Col4a1P02463 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col4a1P02463 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Col4a1P02463 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col4a1P02463 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.93□□□□□ -0.02
Col4a1P02463 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a1P02463 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Col4a1P02463 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.92□□□□□ -0.02
Col4a1P02463 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Col4a1P02463 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.92□□□□□ -0.02
Col4a1P02463 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.92□□□□□ -0.02
Col4a1P02463 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.92□□□□□ -0.02
Col4a1P02463 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.92□□□□□ -0.02
Col4a1P02463 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Gm15744-201ENSMUST00000161734 213 ntBASIC14.92□□□□□ -0.02
Col4a1P02463 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.92□□□□□ -0.02
Col4a1P02463 Gm43058-201ENSMUST00000197645 625 ntBASIC14.92□□□□□ -0.02
Col4a1P02463 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.92□□□□□ -0.02
Col4a1P02463 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.92□□□□□ -0.02
Col4a1P02463 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.92□□□□□ -0.02
Col4a1P02463 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col4a1P02463 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.92□□□□□ -0.02
Col4a1P02463 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col4a1P02463 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a1P02463 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col4a1P02463 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col4a1P02463 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Col4a1P02463 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col4a1P02463 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms