Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
TcraP01849 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Gm13223-201ENSMUST00000118609 747 ntBASIC9.06□□□□□ -0.96
TcraP01849 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC9.06□□□□□ -0.96
TcraP01849 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
TcraP01849 Gm17795-201ENSMUST00000214505 757 ntBASIC9.06□□□□□ -0.96
TcraP01849 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC9.06□□□□□ -0.96
TcraP01849 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.06□□□□□ -0.96
TcraP01849 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.06□□□□□ -0.96
TcraP01849 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
TcraP01849 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.06□□□□□ -0.96
TcraP01849 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
TcraP01849 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
TcraP01849 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
TcraP01849 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
TcraP01849 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
TcraP01849 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC9.05□□□□□ -0.96
TcraP01849 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
TcraP01849 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC9.05□□□□□ -0.96
TcraP01849 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC9.05□□□□□ -0.96
TcraP01849 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC9.05□□□□□ -0.96
TcraP01849 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
TcraP01849 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.05□□□□□ -0.96
TcraP01849 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.05□□□□□ -0.96
TcraP01849 Gm44872-201ENSMUST00000207864 420 ntBASIC9.05□□□□□ -0.96
TcraP01849 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Gm7775-201ENSMUST00000218871 853 ntBASIC9.05□□□□□ -0.96
TcraP01849 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.05□□□□□ -0.96
TcraP01849 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.05□□□□□ -0.96
TcraP01849 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC9.05□□□□□ -0.96
TcraP01849 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
TcraP01849 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.05□□□□□ -0.96
TcraP01849 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
TcraP01849 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
TcraP01849 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
TcraP01849 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
TcraP01849 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
TcraP01849 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
TcraP01849 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms