Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
DhfrP00375 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
DhfrP00375 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.24□□□□□ -0.61
DhfrP00375 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
DhfrP00375 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
DhfrP00375 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.24□□□□□ -0.61
DhfrP00375 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
DhfrP00375 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
DhfrP00375 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
DhfrP00375 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
DhfrP00375 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
DhfrP00375 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
DhfrP00375 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.24□□□□□ -0.61
DhfrP00375 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.24□□□□□ -0.61
DhfrP00375 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
DhfrP00375 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.24□□□□□ -0.61
DhfrP00375 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
DhfrP00375 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
DhfrP00375 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Gm5687-201ENSMUST00000118252 640 ntBASIC11.23□□□□□ -0.61
DhfrP00375 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
DhfrP00375 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.23□□□□□ -0.61
DhfrP00375 Gm6244-201ENSMUST00000178732 841 ntBASIC11.23□□□□□ -0.61
DhfrP00375 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.23□□□□□ -0.61
DhfrP00375 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.23□□□□□ -0.61
DhfrP00375 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.23□□□□□ -0.61
DhfrP00375 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
DhfrP00375 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
DhfrP00375 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.23□□□□□ -0.61
DhfrP00375 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.23□□□□□ -0.61
DhfrP00375 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
DhfrP00375 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.23□□□□□ -0.61
DhfrP00375 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.23□□□□□ -0.61
DhfrP00375 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
DhfrP00375 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
DhfrP00375 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
DhfrP00375 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
DhfrP00375 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.22□□□□□ -0.61
DhfrP00375 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
DhfrP00375 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Gm4984-201ENSMUST00000115987 360 ntBASIC11.22□□□□□ -0.61
DhfrP00375 Gm13612-201ENSMUST00000119276 390 ntBASIC11.22□□□□□ -0.61
DhfrP00375 Gm12138-201ENSMUST00000122180 951 ntBASIC11.22□□□□□ -0.61
DhfrP00375 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.22□□□□□ -0.61
DhfrP00375 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
DhfrP00375 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.22□□□□□ -0.61
DhfrP00375 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
DhfrP00375 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
DhfrP00375 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
DhfrP00375 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms